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tomato stem rot

This is a new one for me, the stems on my tomato plants turn brown (not all
of them) and some, but not all of the fruit starts to rot before its
ripened. I've pulled up the worst of the plants and I'm trying to ripen the
green tomatoes inside. But can anyone tell me what causes this? How can I
prevent it? Should I plant my tomatoes in pots under the eaves of my house
next year to keep them from getting too wet? Thanks. 
Evonne
(zone 8/ soggy pac. nw)
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